Functional MRI (fMRI) in Neurological Disorders

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01 Aug, 2025

Dr. Nikunj Jain

Dr. Nikunj Jain

Co-Founder and HOD - Nuclear Medicine ,

MBBS, DRM, DNB, FEBNM, FANMB, Dip. CBNC

Brain disorders have traditionally been diagnosed using anatomical imaging methods like standard MRI or CT scans, which provide a clear view of brain structures. But understanding how the brain works in real-time and identifying abnormalities in brain activity requires more advanced tools. Functional MRI (fMRI) has emerged as a powerful, non-invasive technique that maps brain function by measuring changes in blood flow related to neural activity. Widely used in research and increasingly in clinical practice, fMRI plays a crucial role in evaluating a variety of neurological disorders such as epilepsy, brain tumors, stroke, Alzheimer's disease, Parkinson's disease, and more.

Functional MRI (fMRI)

fMRI is an imaging technique that measures and maps brain activity by detecting changes in blood flow. When a brain region is more active, it consumes more oxygen, leading to increased blood flow to meet this demand. This physiological response is known as the Blood Oxygen Level Dependent (BOLD) effect. fMRI captures these subtle differences in blood oxygenation and creates dynamic maps that reflect real-time brain activity. Unlike traditional MRI, which shows the anatomy, fMRI visualizes function, providing insights into how different parts of the brain communicate and respond to tasks.

Why is fMRI important in neurological disorders?

Neurological disorders often involve complex disruptions in brain function rather than just structural damage. For instance:

  • Epilepsy may stem from abnormal neuronal firing.
  • Stroke survivors often face changes in brain networks supporting language or motor function.
  • Neurodegenerative diseases like Alzheimer’s affect memory circuits.
  • Psychiatric conditions may involve altered connectivity.

fMRI helps clinicians:

  • Identify critical brain regions before surgery (functional mapping).
  • Detect abnormal connectivity or activity.
  • Monitor treatment effects over time.
  • Understand disease progression and tailor rehabilitation.

In summary, fMRI bridges the gap between anatomy and function, providing a more holistic understanding of brain disorders.

Major applications of fMRI in neurological disorders

1. Epilepsy

  • Identifying seizure foci: Helps locate the area where seizures originate.
  • Pre-surgical planning: Maps language, motor, and memory areas to avoid functional damage during surgery.
  • Evaluating changes in functional networks due to chronic seizures.

2. Brain tumors

  • Pre-operative mapping: Determines the proximity of tumors to critical functional areas.
  • Reduces surgical risks: By preserving areas responsible for speech, movement, and cognition.
  • Guides decisions about surgical approach and extent of resection.

3. Stroke

  • Assessing functional recovery: Monitors how other brain areas compensate for damaged regions.
  • Rehabilitation planning: Customizes therapy based on brain activation patterns.
  • Predicting outcomes: Helps estimate potential for language or motor improvement.

4. Alzheimer’s disease and dementia

  • Early detection: Reveals reduced activity in memory-related regions before significant atrophy appears.
  • Research: Helps understand the spread of functional decline.
  • Monitoring interventions: Tracks effects of medications or cognitive training.

5. Parkinson’s disease

  • Examines changes in motor and cognitive networks.
  • Research tool: Helps explore mechanisms underlying motor symptoms and cognitive decline.

6. Psychiatric disorders (e.g., depression, schizophrenia)

  • Identifies abnormal connectivity in mood and cognition networks.
  • Guides novel treatments like neurofeedback or brain stimulation.

7. Traumatic brain injury (TBI)

  • Evaluates diffuse brain network disruption.
  • Helps plan cognitive rehabilitation.

These examples illustrate how fMRI supports diagnosis, treatment planning, and monitoring across various neurological and psychiatric conditions.

How does an fMRI scan work?

  • Preparation: Patients lie inside an MRI scanner. Depending on the purpose, they may be asked to perform specific tasks (e.g., finger tapping, word generation) or simply rest.
  • Task-based fMRI: Measures brain activity while the patient performs a task, highlighting areas involved in that function.
  • Resting-state fMRI: Measures spontaneous brain activity when the patient is at rest, revealing functional connectivity networks.
  • Image acquisition: The scanner records rapid sequences of brain images.
  • Analysis: Specialized software processes the data to produce activation maps, showing which regions are engaged during tasks or at rest.

A typical fMRI scan lasts about 30–60 minutes.

Benefits of fMRI in neurological disorders

  • Non-invasive and safe: Uses no ionizing radiation.
  • Dynamic view of brain function: Captures real-time changes.
  • Individualized care: Helps tailor surgical and therapeutic plans.
  • Early detection: Identifies functional decline before structural changes.
  • Research and innovation: Expands understanding of complex brain disorders.

Limitations and challenges

  • Motion sensitivity: Patients must remain still; movement can blur results.
  • Complex analysis: Requires expertise to interpret.
  • Not universally available: Needs advanced equipment and trained professionals.
  • Indirect measure: Reflects blood flow changes, not direct neuronal firing.

Safety considerations

  • fMRI is generally safe, but patients with:
    • Certain implanted medical devices (e.g., pacemakers, some cochlear implants).
    • Metallic foreign bodies.
    • Claustrophobia.
      Should inform their doctor beforehand. The technique itself doesn’t involve harmful radiation.

Functional MRI in India: growth and accessibility

In India, major hospitals and specialized imaging centers, especially in cities like Delhi, Mumbai, Bengaluru, Chennai, and Hyderabad, have embraced fMRI:

  • Pre-surgical planning: Widely used for epilepsy and tumor surgeries.
  • Research: Enhancing understanding of dementia, stroke, and psychiatric disorders.
  • Private centers and academic hospitals: Offer fMRI as part of advanced neuroimaging packages.

Conclusion

Functional MRI (fMRI) has revolutionized the understanding and management of neurological disorders by allowing clinicians and researchers to visualize real-time brain activity and connectivity. From mapping vital functional areas before brain surgery to investigating the neural basis of diseases like epilepsy, Alzheimer’s, and Parkinson’s, fMRI provides unique insights beyond what structural imaging offers. While challenges remain, its role in personalized care, early diagnosis, and rehabilitation planning continues to expand, offering hope to millions affected by complex brain disorders. As technology advances, fMRI’s potential in routine neurology practice will only increase, shaping the future of brain health.

Frequently Asked Questions (FAQ’s)

What is the main difference between MRI and fMRI?

MRI shows brain anatomy (structure), while fMRI shows real-time brain activity by measuring blood flow changes.

Is fMRI painful?

No, fMRI is non-invasive and painless. You simply lie still in the scanner.

How long does an fMRI scan take?

Typically, 30–60 minutes depending on the complexity and tasks involved.

Can fMRI help in brain surgery?

Yes, it maps areas like language and motor function to guide surgeons and avoid critical regions.

Is fMRI safe?

Yes. It uses no radiation, but patients with certain implants should consult their doctor first.

Can fMRI diagnose Alzheimer’s disease?

It can detect functional changes suggestive of early Alzheimer’s, but diagnosis also requires clinical and other imaging data.

Where is fMRI available in India?

In major cities like Delhi, Mumbai, Bengaluru, and Chennai at specialized hospitals and imaging centers.

What is resting-state fMRI?

It studies brain network connectivity while you’re at rest, revealing functional networks without specific tasks.

Why is fMRI used in epilepsy?

To identify seizure foci and map vital areas before surgery.

Does fMRI replace traditional MRI?

No. It complements structural MRI, providing additional functional information for comprehensive evaluation.

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